Citing PyJAMAS

If you use PyJAMAS, please cite:

Fernandez-Gonzalez R, Balaghi N, Wang K, Hawkins R, Rothenberg K, McFaul C, Schimmer C, Ly M, do Carmo A, Scepanovic G, Erdemci-Tandogan G, Castle V. PyJAMAS: open-source, multimodal segmentation and analysis of microscopy images. Bioinformatics. 2021 Aug 13:btab589. doi: 10.1093/bioinformatics/btab589.

If you use ReSCU-Net, please also cite:

Hawkins R, Balaghi N, Rothenberg KE, Ly M, Fernandez-Gonzalez R. ReSCU-Nets: Recurrent U-Nets for segmentation of three-dimensional microscopy data. J Cell Biol. 2025 224(1):e202506102. doi: 10.1083/jcb.202606102.